ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIRf1628
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTCGTCGCCGACGAGTGGGGC miRNA* CCCTACAGTCGACGACGACGA mismatches: 2 bulges: 2 |
pre-miRNA
CCGAGATCCCCGACCCTACAGTCGACGACGACGAGTGGGGCCGCGAGCCGCCCGCTTCCGCGTCGGGTAACTCGCGCCCCGTCGTCGCCGACGAGTGGGG
CGAGCCGGGGG
dot-bracket secondary structure
......((((((.((((((.((((.(((((((....(((((.(((((..((((((......).)))))..))))))))))))))))).))))..))))))
.....))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
CCGAGATCCCCGACCCTACAGTCGACGACGACGAGTGGGGCCGCGAGCCGCCCGCTTCCGCGTCGGGTAACTCGCGCCCCGTCGTCGCCGACGAGTGGGG
CGAGCCGGGGG
dot-bracket secondary structure
......((((((.((((((.((((.(((((((....(((((.(((((..((((((......).)))))..))))))))))))))))).))))..))))))
.....))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q7XBW5|PAP3_ORYSJ: 0.000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
