ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIRf542
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCGGGCCCACATGTCAGCCAC miRNA* GCAGCTGACATGTGGGCCACCAT mismatches: 5 bulges: 0 |
pre-miRNA
GGATCCTCTGCAGTACTGCCCTCTGACTTTGGGCAGCTGACATGTGGGCCACCATGCTAGCGGGCCCACATGTCAGCCACAGAGTCCCTCTGCAGTATTG
CAGGGAAGG
dot-bracket secondary structure
...(((.((((((((((((.....(((((((....(((((((((((((((............)))))))))))))))..))))))).....)))))))))
))))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGATCCTCTGCAGTACTGCCCTCTGACTTTGGGCAGCTGACATGTGGGCCACCATGCTAGCGGGCCCACATGTCAGCCACAGAGTCCCTCTGCAGTATTG
CAGGGAAGG
dot-bracket secondary structure
...(((.((((((((((((.....(((((((....(((((((((((((((............)))))))))))))))..))))))).....)))))))))
))))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
