ABOUT THIS RECORDspecies: Linum usitatissimum
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Linum usitatissimum Linum Linaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCATCA miRNA* ATGATGATGGTGGCGATGAAG mismatches: 1 bulges: 0 |
pre-miRNA
GTAAGAAGGAATCATCATCATCATCATCATCAATAGGCTCAGCTTCTATTGATTCCTCATCTTGTTTCTCTGACAGCAATGATGATGATGATGGTGGCGA
TGAAGCATCTTCG
dot-bracket secondary structure
....(((((..(((((.(((((((((((((((.((.((((((.....((.(((.....)))..))....))))..))..)).))))))))))))))).))
)))....))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTAAGAAGGAATCATCATCATCATCATCATCAATAGGCTCAGCTTCTATTGATTCCTCATCTTGTTTCTCTGACAGCAATGATGATGATGATGGTGGCGA
TGAAGCATCTTCG
dot-bracket secondary structure
....(((((..(((((.(((((((((((((((.((.((((((.....((.(((.....)))..))....))))..))..)).))))))))))))))).))
)))....))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.0004 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
