ABOUT THIS RECORDspecies: Lolium perenne
miRNA family: MIR157
source: miRNEST
Taxonomy by NCBI:
Lolium perenne Lolium Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGACAGAAGAGAGTGAGCAC miRNA* GCTCACTGCTCTATCTGTCAGCC mismatches: 0 bulges: 2 |
pre-miRNA
GTGTGTGGAAGTTGACAGAAGAGAGTGAGCACCCATGGTGTTTCCTTTGCATCAAGGGGCGTGCCATGGAGCTATGCGTGCTCACTGCTCTATCTGTCAG
CCACTGATCA
dot-bracket secondary structure
.((..(((..(((((((((((((((((((((((((((((((.(((((((...))))))).))))))))).((...))))))))))).)))).))))))))
)..)))..))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GTGTGTGGAAGTTGACAGAAGAGAGTGAGCACCCATGGTGTTTCCTTTGCATCAAGGGGCGTGCCATGGAGCTATGCGTGCTCACTGCTCTATCTGTCAG
CCACTGATCA
dot-bracket secondary structure
.((..(((..(((((((((((((((((((((((((((((((.(((((((...))))))).))))))))).((...))))))))))).)))).))))))))
)..)))..))
SIMILARITIES| miRBase ssp-MIR156: 0.00000002 PMRD zma-miR156i: 0.00000009 microPC miR156: 0.000000006 | UniProt no hits RFAM mir-156: 0.0000004 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
