miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Lolium perenne



ABOUT THIS RECORD

ID: MNEST001419
species: Lolium perenne
miRNA family: MIRf35
source: miRNEST

Taxonomy by NCBI:
Lolium perenne Lolium Loliinae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTCATGGGACGGAGGGAGTA

miRNA*
 CTCCCTCCGTCTCATGAAACG

mismatches: 0
bulges: 0
View larger
pre-miRNA
 AACAACATTATTATACTCCCTCCGTCTCATGAAACGTGTCTGAGATTTGTCAAAATTCGAATGTATCTAGATACTATTTAGTGGCTTGGTACATCTAAAT
TTAAGCAATCTCCGACATGTTTCATGGGACGGAGGGAGTATGTGTGATTAAG

dot-bracket secondary structure
.....(((...(((((((((((((((((((((((((((((.((((((.((..(((((...(((((((.((.((((....)))).)).)))))))...)))
))..)))))))).))))))))))))))))))))))))))))).)))......


SIMILARITIES
miRBase no hits

PMRD osa-miRf11182-akr: 0.0001

microPC no hits		UniProt no hits

RFAM MIR1122: 0.0005		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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