miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000147
species: Arachis ipaensis
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCTTCC

miRNA*
 AAGACGTCATGATGGAACGC

mismatches: 5
bulges: 1
View larger
pre-miRNA
 CCCCTTACGGCCGGGGAACGCTCTATAGTATTATCCAAAAAATTCATTGATAATGGAAGACGTCATGATGGAACGCTCTAAATCATCATCATCATCATCA
TCATCTTCCAGCTAATGTTGTTTACAGCTTAGTCTCCAAATACACCAATTGTGTTCTTATCTCCTTTT

dot-bracket secondary structure
((((........))))...(((....))).(((((.............))))).((((((.((.(((((((....................))))))).)
)..)))))).(((((.((((....))))))))).....((((((.....)))))).............


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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