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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000148
species: Arachis ipaensis
miRNA family: MIR162
source: miRNEST

Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCGATAAACCTCTGCATCCAG

miRNA*
 GGAGGCAGCGGTTCATCGATC

mismatches: 4
bulges: 0
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pre-miRNA
 AATTTGTAAGGTGAAGTCACTGGAGGCAGCGGTTCATCGATCTCTTCCTGAAATTTGGCTGTGGAATCCTACACAAAGCAAGAATCGGGCGATAAACCTC
TGCATCCAGCGCTCCACTTTGCCTCTT

dot-bracket secondary structure
.....((((((((.(((..(((((.((((.((((.((((.((..(((.((...((((...((((....)))).)))).)).)))..)).)))).)))).)
))).))))).))).)))))))).....


SIMILARITIES
miRBase vvi-MIR162: 4e-16

PMRD vvi-miR162: 4e-16

microPC miR162: 2e-27		UniProt no hits

RFAM MIR162_2: 0.00000000003		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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