miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST000150
species: Arachis ipaensis
miRNA family: MIRf968
source: miRNEST

Taxonomy by NCBI:
Arachis ipaensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGTTAAACTCAGGAGGGATA

miRNA*
 TCTATCCAGAGTTTCACGGCT

mismatches: 3
bulges: 0
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pre-miRNA
 ATTAATAAGGTAGAATCTGTTAAACTCAGGAGGGATAGCGCCACATATAACACAATTCATTCGTATTGGCGCTATCTATCCAGAGTTTCACGGCTTCTTC
TTACTTTA

dot-bracket secondary structure
.....(((((.((((.((((.((((((.(((.(((((((((((.((((..............))))))))))))))).))).)))))).)))).))))))
))).....


SIMILARITIES
miRBase vvi-MIR390: 0.000000005

PMRD vvi-miR390: 0.000000005

microPC miR390: 0.0003		UniProt no hits

RFAM MIR390: 0.00000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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