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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST001509
species: Manihot esculenta
miRNA family: MIRf661
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CATGCCAAAGGAGATTTGCCC

miRNA*
 GCAAAACCTCCATTGGCATGCA

mismatches: 2
bulges: 1
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pre-miRNA
 TTGCATTACAGGGCAAAACCTCCATTGGCATGCAGCCACACTAAGATTCTCTATCCTTGTTGTGCATTCCTATAGTGTGCTCCATGCCAAAGGAGATTTG
CCCGGCAACACT

dot-bracket secondary structure
((((......(((((((..((((.((((((((.(((.((((((.............................))))))))).)))))))).)))).))))
))).))))....


SIMILARITIES
miRBase rco-MIR399c: 0.00000000009

PMRD ptc-miR399j: 0.0000000004

microPC miR399: 9e-48		UniProt no hits

RFAM mir-399: 0.0000000001		most similar mature miRNAs

Identical with: miR399 from microPC (MNEST045407)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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