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Species belonging to selected taxon:

Manihot esculenta



ABOUT THIS RECORD

ID: MNEST001522
species: Manihot esculenta
miRNA family: MIRf282
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAGAGGTTAAGGTTGATGGG

miRNA*
 CGTCAACCAACCCTTTCTTG

mismatches: 4
bulges: 1
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pre-miRNA
 GATGCTGAGAGGTTAAGGTTGATGGGAATGTTGTTTGGCTCGAGGTGACATAGGTTTGATCTTTTATCTTTGAAAATTTCTGTTTCTTGGTTTCTTTTTT
CTGGAGAAAATTCAAAGATACATAGCCCTATGTAATCTCGGACCAGGCTTCATTCCCGTCAACCAACCCTTTCTTGAT

dot-bracket secondary structure
......((((((....((((((((((((((..((((((.(((((((.(((((((.(((......((((((((((..(((((...................
..)))))...))))))))))..))).))))))).))))))).))))))..))))))))))))))...)))))).....


SIMILARITIES
miRBase tcc-MIR166b: 0.00000000000004

PMRD ptc-miR166d: 0.0000006

microPC miR166: 0.000002		UniProt no hits

RFAM mir-166: 0.00000004		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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