miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Antirrhinum majus, Fraxinus excelsior, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Ocimum basilicum, Salvia miltiorrhiza, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor

ABOUT THIS RECORD

ID: MNEST001564
species: Mimulus guttatus
miRNA family: MIRf1627
source: miRNEST

Taxonomy by NCBI:
Mimulus guttatus Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GAGCTCGAGCTCGAGCCAGCC

miRNA*
TGGGCTCGAGCTCGAGCTCGA

mismatches: 4
bulges: 0

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pre-miRNA
GATTGGGCTCGAGCTCGAGCTCGAGCCAAAAAAAGAAGAACTCGACGAGCTCGAGCTCGAGCCAGCC

dot-bracket secondary structure
.....((((((((((((((((((......................))))))))))))))))))....

SIMILARITIES

miRBase no hits

PMRD osa-miRf11321-akr: 0.00005

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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