miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Antirrhinum majus, Fraxinus excelsior, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Ocimum basilicum, Salvia miltiorrhiza, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor



ABOUT THIS RECORD

ID: MNEST001578
species: Mimulus guttatus var. nasutus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Mimulus guttatus var. nasutus Mimulus guttatus subsp. guttatus Mimulus guttatus Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATCA

miRNA*
 GTGATGGTGGTGAAGATGGTG

mismatches: 1
bulges: 0
View larger
pre-miRNA
 AACGGATCAAATCATCATCATCATCATCATCATCAGTGCAGGTAGGTAGTAGTCTGGTACTGGTGGTAGCCATTTCCAAAGAAGCTTCCATGATTAGGCG
AAAAGTTATAAGCACCACCACCGAAAAACGAAGGAACTTGATGGTGATGGTGGTGAAGATGGTGGTGGTCGG

dot-bracket secondary structure
....(((((.((((((.((((((((((((((((((((((..((((......(((((((....((((.(((...(((....)))))).)))).))))))).
.....))))..))))..((..((.....))..))....)))))))))))))))))).))))))..)))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-598: 0.0002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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