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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST001602
species: Nicotiana benthamiana
miRNA family: miR166d
source: miRNEST

Taxonomy by NCBI:
Nicotiana benthamiana Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGTCTGGCTCGAGG

miRNA*
 TCGGACCAGGCTTCATTCCCC

mismatches: 4
bulges: 0
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pre-miRNA
 TTTCTATTGTGGGGAATGTTGTCTGGCTCGAGGAATCTTTAATCTTGATCAAATTCTTTACACAGATCTATCTATTATTATATATGTTGCTTATACATTT
TAGATCTTATATAGATCTATAATTGTTAGTTGTTAGATCTATGAATTTTGATTATATTTTTTTGGGTCGTCGGACCAGGCTTCATTCCCCTCAAAGATT

dot-bracket secondary structure
..(((.(((.((((((((..((((((.((((.((.((...((...((((((((....((.((.(((((((..................(((...(((...
(((((((.....)))))))....))).)))...))))))).)))).))))))))....))...)).)).)))).))))))..)))))))).))))))..


SIMILARITIES
miRBase aqc-MIR166e: 0.000000003

PMRD aqc-miR166e: 0.000000003

microPC miR166: 1e-85		UniProt no hits

RFAM mir-166: 0.0000008		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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