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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST001616
species: Nicotiana tabacum
miRNA family: MIRf599
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTGGGATTACAGGTGTGAGC

miRNA*
 TCATTTTTGTATTTTTAGTAG

mismatches: 2
bulges: 0
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pre-miRNA
 CACCACATGTGGCTCATTTTTGTATTTTTAGTAGAGATGGAGTTTCACCATGCTGACCAGGCGGGTCTTGAACTCTTGACCTCGTGATCCCCCTGCCTCAG
CCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACTCC

dot-bracket secondary structure
).......(((((((((.((((((.((((((((.....((((.........(((((.((((.(((((.(((..........))).))))).))))..))))
))))).....)))))))).)))))).)))))))))......


SIMILARITIES
miRBase hsa-mir-3929: 5.0E-13

PMRD ptc-miRf10804-akr: 3.0E-14

microPC no hits		UniProt sp|Q96N38|ZN714_HUMAN: 2.0E-12

RFAM PMetazoa_SRP: 5.0E-38		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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