ABOUT THIS RECORDspecies: Nicotiana tabacum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCTGTCCCTGAATAACG miRNA* ATATCCAGGGTCAGAGAGGAGG mismatches: 3 bulges: 1 |
pre-miRNA
TTTCAGTAATTCCACTGGCTTCCCTCTGTCCCTGAATAACGGTAGTCTAACCTTTCTCTGGTGAAGAAGAGAAACGTGAGACTAACGATATCCAGGGTCA
GAGAGGAGGTGGCGGCATCAAGTGGA
dot-bracket secondary structure
..........((((((.(((((((((((.(((((.(((.((.((((((.((.(((((((........))))))).)).)))))).)).))).))))).))
))).)))......)))....))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTCAGTAATTCCACTGGCTTCCCTCTGTCCCTGAATAACGGTAGTCTAACCTTTCTCTGGTGAAGAAGAGAAACGTGAGACTAACGATATCCAGGGTCA
GAGAGGAGGTGGCGGCATCAAGTGGA
dot-bracket secondary structure
..........((((((.(((((((((((.(((((.(((.((.((((((.((.(((((((........))))))).)).)))))).)).))).))))).))
))).)))......)))....))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
