ABOUT THIS RECORDspecies: Nicotiana tabacum
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAGCTTCATCTTCTCTTGTT miRNA* AAAGAGGGGGCGGAGTGAGA mismatches: 2 bulges: 1 |
pre-miRNA
GAGAGAAGAAAAAAAGAGGGGGCGGAGTGAGAAGTATACACNCCGATATACATTCNTGGGAANTACACTGAATATACAGGGACAGAATTCATTTTGGAGA
GTATNTTGGAAGTTGAAAAGAATAGTTACTGTTTCATTGCCTCGCTTAAGATCTGAAATAGTCAGAACCTTCCTGCCTTTTACTTCTTCTCTATACTTGG
AGTCGTTTATAGTCTCCTGGGTTTACTACTATTCCTACTGTTACTGGTCTATTCCTGTGTTGCTGGACTGTCGTTGTTGTGCTACATTGTTACTACTGTT
GCTGCTTCTCAGCTTCATCTTCTCTTGTTTTCCAATAC
dot-bracket secondary structure
.......(((((.(((((((((.((((((((((((..((((..((((.((.((...(((((..((...(((((...(((((((.((.((((...((((((
.......((((((.(((.((....((((((((((((.................)))))))))...)))....))...))).))))))))))))....)))
).)).......))).)))).)))))....)).)))))..))))..((((((............))))))))))..).)))((.(((.((....)).))).
)).)))))))).)))).))))))))).)))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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GAGAGAAGAAAAAAAGAGGGGGCGGAGTGAGAAGTATACACNCCGATATACATTCNTGGGAANTACACTGAATATACAGGGACAGAATTCATTTTGGAGA
GTATNTTGGAAGTTGAAAAGAATAGTTACTGTTTCATTGCCTCGCTTAAGATCTGAAATAGTCAGAACCTTCCTGCCTTTTACTTCTTCTCTATACTTGG
AGTCGTTTATAGTCTCCTGGGTTTACTACTATTCCTACTGTTACTGGTCTATTCCTGTGTTGCTGGACTGTCGTTGTTGTGCTACATTGTTACTACTGTT
GCTGCTTCTCAGCTTCATCTTCTCTTGTTTTCCAATAC
dot-bracket secondary structure
.......(((((.(((((((((.((((((((((((..((((..((((.((.((...(((((..((...(((((...(((((((.((.((((...((((((
.......((((((.(((.((....((((((((((((.................)))))))))...)))....))...))).))))))))))))....)))
).)).......))).)))).)))))....)).)))))..))))..((((((............))))))))))..).)))((.(((.((....)).))).
)).)))))))).)))).))))))))).)))))......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
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