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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST001656
species: Nicotiana tabacum
miRNA family: MIRf968
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGTAAAGCTCAGGAGGGATA

miRNA*
 TCCATCCTGAGTTTCATGGTT

mismatches: 2
bulges: 0
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pre-miRNA
 TTGTGGAAATTGCATGGGAAATCTGTAAAGCTCAGGAGGGATAGCACCATGGAGAGACTATACTATCTTCATGAGCTTAAAACTGCGATCCGTTGCGCTAT
CCATCCTGAGTTTCATGGTTTCTTTCATGCTCTCTATT

dot-bracket secondary structure
).(((((....((((((((((.((((.((((((((((.(((((((..((((((((..........))))))))((.......))((((....)))))))))
)).)))))))))).)))))))))..)))))..))))).


SIMILARITIES
miRBase gma-MIR390a: 4.0E-10

PMRD gma-miR390b: 2.0E-9

microPC miR390: 1.0E-44		UniProt no hits

RFAM 0MIR390: 8.0E-9		most similar mature miRNAs

Identical with: miR390 from microPC (MNEST044796)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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