ABOUT THIS RECORDspecies: Nuphar advena
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Nuphar advena Nuphar Nymphaeaceae Nymphaeales basal Magnoliophyta Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTTCCCATTCCTCCCATCC miRNA* TTGGTTGGAATGGGAAAGATT mismatches: 5 bulges: 0 |
pre-miRNA
TTATATTTGCATAGGCAAACGGCAGAGGGAAAGAGTGGCCGGAAAATTTGTGTTGGTTGGAATGGGAAAGATTTGAACATTATATGAACATTTTTATCTT
TCCCATTCCTCCCATCCCACAGCTTTCCTGCTATTCTTTCCTCCTGCTTTTTGCCATGATTCCATT
dot-bracket secondary structure
.............((((((.(((((.(((((((((((((.(((((..(((((.(((..((((((((((((((..(((..((.....))..)))..)))))
)))))))))..)))...))))).))))).))))))))))))).))))).))))))...........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTATATTTGCATAGGCAAACGGCAGAGGGAAAGAGTGGCCGGAAAATTTGTGTTGGTTGGAATGGGAAAGATTTGAACATTATATGAACATTTTTATCTT
TCCCATTCCTCCCATCCCACAGCTTTCCTGCTATTCTTTCCTCCTGCTTTTTGCCATGATTCCATT
dot-bracket secondary structure
.............((((((.(((((.(((((((((((((.(((((..(((((.(((..((((((((((((((..(((..((.....))..)))..)))))
)))))))))..)))...))))).))))).))))))))))))).))))).))))))...........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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