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Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST001711
species:
Panicum virgatum
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTACATTTTGAAACGGAGGGA
miRNA*
CCTCTGTTTCAAAATGTAGGT
mismatches:
0
bulges:
0
View larger
pre-miRNA
ACCAATTCTTTAGATGATACTC
CCTCTGTTTCAAAATGTAGGT
TGTTTTGGTTTTTTTAGGTTCATAGTGTTTGCTAAGCATCTTTATATAACATATATG
TCTAGATACATAGCAAAATATATGAATTTAGAAAAGTTTAAACGAC
CTACATTTTGAAACGGAGGGA
GTACATAGAGTGTCTTGGA
dot-bracket secondary structure
.((((..(((((..((.(((((
(((((((((((((((((((((
(((((.((((((((((((((((((...(((((((...((((.((((((...))))))
...))))...)))))))...)))))))))))))))))).)))))))
)))))))))))))))))))))
))))))))))....)))).
SIMILARITIES
miRBase
osa-MIR806c
:
0.0000006
PMRD
osa-miR806c
:
0.0000006
microPC
miR1439
:
0.000009
UniProt
no hits
RFAM
MIR1122: 0.0000007
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record