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Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST001797
species: Panicum virgatum
miRNA family: MIR2504
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACCAAGTTTATAGAAAAA

miRNA*
 TTCTCTATAAATTTGGTCAAAC

mismatches: 1
bulges: 1
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pre-miRNA
 CAAATTTATCCTGCCATCAGGATATATATATACTCCCTCTATCCTGAAATGTAAGTCATTTTGGTTTGTCTTAAATCAAATTGTTCCATGTTTGACCAAG
TTTATAGAAAAAATAATAATATTTTGAATGTCAAATAAGAATAATTAGATCAACAATGAAATATACTTTCTTAATTTACTTATTTGATGTCTTAGATGTT
AGTATTCTTCTCTATAAATTTGGTCAAACTTAGACTACTTTGACTTAGGACAAAGCAAAATGACTTACATTTCAGGATGGAGGGAGTAGGTGTCTATCCG
GCATTTGGAGCAGCAAT

dot-bracket secondary structure
........(((((((....(((((.((((.(((((((((((((((((((((((((((((((((.((((((((((.(((((.((.((...(((((((((((
((((((((((.((((.((((((((.((.(((((((((((...((((((.........((((.....))))))))))..)))))))))))))..)))))))
).)))).)).)))))))))))))))))))...)).)).))))).)))))))))).))))))))))))))))))))))))))))))))).)))).))))))
)))...)))........


SIMILARITIES
miRBase osa-MIR437: 0.000004

PMRD bdi-miR2504b: 0.0000003

microPC miR437: 0.0003		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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