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Species belonging to selected taxon:

Panicum virgatum, Cenchrus ciliaris



ABOUT THIS RECORD

ID: MNEST001799
species: Panicum virgatum
miRNA family: MIR2504
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACCAAGTTTATGGAAAAG

miRNA*
 TCTCTATAAATTTGGTCAAAC

mismatches: 1
bulges: 0
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pre-miRNA
 TACTCCCTCTGTCCTGAAATGTAAGGCATTTTGGTTTGTCCTAAGTCAAACTGTTCTAAGTTTGACCAAGTTTATGGAAAAGAGTAATAATATTTTGAAT
ACCAGATGAGAATAATTAGATCCATTATGAAATATATTTTCATAATTTACTTATTTGATGTGTTAGATCCTGATATTCTTCTCTATAAATTTGGTCAAAC
TTAGACTACTTTGACTTAGGACAAAGCAAAATGACTTGCATTTCAGGATGAAGTACTG

dot-bracket secondary structure
......((.((((((((((((((((.(((((((.((((((((((((((((.((.((((((((((((((((((((((((.(((((((.((..((((...((
(.((((((((((...........(((((((((.....))))))))))).)))))))).)))...))))..)).))))))).)))))))))))))))))))
))))).)).)))))))))))))))).))))))).)))))))))))))))).)).....


SIMILARITIES
miRBase osa-MIR437: 0.0000000002

PMRD osa-miR437: 0.0000000002

microPC no hits		UniProt no hits

RFAM MIR1122: 0.001		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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