miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Panicum virgatum



ABOUT THIS RECORD

ID: MNEST001807
species: Panicum virgatum
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Panicum virgatum Panicum Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTCCCTCCGTTCCAAAATGT

miRNA*
 ATTTTGGAACGGAGGGAGTAT

mismatches: 0
bulges: 0
View larger
pre-miRNA
 TTACCAGCTGGCATGCTTGCTACTCCCTCCGTTCCAAAATGTAGATCGTTTTGACTTTTCTAGATTCATAGTGTTTGCTATGCATCTAGATATAACATAT
GTCTAGATACATAGCAAAATATATGAATCTAAAAAAGTCAAAACGACCTATATTTTGGAACGGAGGGAGTATATCTTATGTCACCCTTTT

dot-bracket secondary structure
........(((((((.....((((((((((((((((((((((((.((((((((((((((.((((((((((...(((((((((.(((((((((((...)))
)))))))).)))))))))...)))))))))).)))))))))))))).)))))))))))))))))))))))).....))))))).......


SIMILARITIES
miRBase tae-MIR1137: 0.0002

PMRD osa-miRf11780-akr: 0.000002

microPC miR1439: 0.0000002		UniProt no hits

RFAM MIR1122: 6e-23		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;