ABOUT THIS RECORDspecies: Petunia axillaris subsp. axillaris
miRNA family: MIR166
source: miRNEST
Taxonomy by NCBI:
Petunia axillaris subsp. axillaris Petunia axillaris Petunia Petunioideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCTC miRNA* GGAATGAAGACTGATCCAAGA mismatches: 5 bulges: 0 |
pre-miRNA
TAGAAGAAAAATAAAGTGTTTGGAATGAAGACTGATCCAAGATCCTCCTTTCTTTTTTCTTTTTGTCTCTTCTTCTTTTCTTATAACCTTTTTTTCTTTT
AAGTACATTTCTCTTCTCTACTCTTGTGTATTTCTTCTTCTAGGGTCTCTTTGCTTATTGGTTGAAAGTTATAATCTAAGTTCAAGAGATATTATGGAAC
GATCTCGGACCAGGCTTCATTCCTCACACCCATTTTTCAGCAG
dot-bracket secondary structure
.....(((((((...((((..(((((((((.(((.(((.(((((.(((...............((((((((...(((...(((((((.((((..((...(
(((((..........(((((....................)))))......))))))..))..)))))))))))...)))...))))))))....)))..
))))).))).))).)))))))))..))))..))))))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAGAAGAAAAATAAAGTGTTTGGAATGAAGACTGATCCAAGATCCTCCTTTCTTTTTTCTTTTTGTCTCTTCTTCTTTTCTTATAACCTTTTTTTCTTTT
AAGTACATTTCTCTTCTCTACTCTTGTGTATTTCTTCTTCTAGGGTCTCTTTGCTTATTGGTTGAAAGTTATAATCTAAGTTCAAGAGATATTATGGAAC
GATCTCGGACCAGGCTTCATTCCTCACACCCATTTTTCAGCAG
dot-bracket secondary structure
.....(((((((...((((..(((((((((.(((.(((.(((((.(((...............((((((((...(((...(((((((.((((..((...(
(((((..........(((((....................)))))......))))))..))..)))))))))))...)))...))))))))....)))..
))))).))).))).)))))))))..))))..))))))).....
SIMILARITIES| miRBase osa-MIR166g: 0.0000000008 PMRD osa-miR166g: 0.0000000008 microPC miR166: 0.000003 | UniProt no hits RFAM mir-166: 0.00000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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