ABOUT THIS RECORDspecies: Phaseolus coccineus
miRNA family: MIRf375
source: miRNEST
Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCAGCTGCAGCATCTTCAGA miRNA* CAGAGATGTTTGCATTGTTGG mismatches: 4 bulges: 2 |
pre-miRNA
TCAATGGCGCCAGCAGCTGCAGCATCTTCAGATGATATAAAACCCAGAGATGTTTGCATTGTTGGTGTTGCGC
dot-bracket secondary structure
.....(((((((((((.(((((((((((..................)))))).))))))))))))))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCAATGGCGCCAGCAGCTGCAGCATCTTCAGATGATATAAAACCCAGAGATGTTTGCATTGTTGGTGTTGCGC
dot-bracket secondary structure
.....(((((((((((.(((((((((((..................)))))).))))))))))))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
