ABOUT THIS RECORDspecies: Picea abies
miRNA family: MIRf1450
source: miRNEST
Taxonomy by NCBI:
Picea abies Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTCGTTCCCTCAAGTTGTTT miRNA* GCGCTCTGAATCTGCGAAGCT mismatches: 4 bulges: 2 |
pre-miRNA
ATTGAGCCTGGCTTCGTTCCCTCAAGTTGTTTATTCTCGAGCGCTCTGAATCTGCGAAGCTACGAGCAC
dot-bracket secondary structure
.....((.(((((((((....((((((.((((......))))))).)))....)))))))))...))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
ATTGAGCCTGGCTTCGTTCCCTCAAGTTGTTTATTCTCGAGCGCTCTGAATCTGCGAAGCTACGAGCAC
dot-bracket secondary structure
.....((.(((((((((....((((((.((((......))))))).)))....)))))))))...))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
