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Species belonging to selected taxon:

Cryptomeria japonica, Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST001929
species: Picea engelmannii x Picea glauca
miRNA family: MIRf1030
source: miRNEST

Taxonomy by NCBI:
Picea engelmannii x Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACGGCTTTCTTGAGCTTCTTA

miRNA*
 GGAAGTTCAAGAAAGCCGTGG

mismatches: 1
bulges: 0
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pre-miRNA
 CCTTTAATAATTTCCCACGGCTTTCTTGAGCTTCTTATGCGGATCTGTTGGCGGTGAGATTGACCGCCAACACTGCCGATCGGGAAGTTCAAGAAAGCCG
TGGAAAAATATGACAG

dot-bracket secondary structure
......(((.(((.((((((((((((((((((((((...(((...((((((((((.......))))))))))...)))...)))))))))))))))))))
))).))).))).....


SIMILARITIES
miRBase pab-MIR396c: 5e-34

PMRD ptc-miRf10517-akr: 0.000006

microPC miR396: 1e-28		UniProt no hits

RFAM MIR396: 0.000002		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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