miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis



ABOUT THIS RECORD

ID: MNEST001944
species: Picea glauca
miRNA family: MIR3709
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCAGATGCTTTAAATTCCCGA

miRNA*
GGGATTTAAAGCATTTGAAG

mismatches: 0
bulges: 1

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pre-miRNA
AGCAGCATCGTGTGGCATAAATTCAAGAATTTCAGATGCTTTAAATTCCCGACAGATTCTTGCGATGACCAAATGGATTTCGGGATTTAAAGCATTTGAA
G
CTCTGGATTTATGCCAAACAGGAGCGCA


dot-bracket secondary structure
.((.((.((((.(((((((((((((.((.(((((((((((((((((.(((((..(((((...............))))))))))))))))))))))))))
)
.))))))))))))))).)).)).)))).



SIMILARITIES
miRBase pab-MIR3709a: 2e-49

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: pab-MIR3709a from miRBase (MNEST039410)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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