miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis



ABOUT THIS RECORD

ID: MNEST001951
species: Picea glauca
miRNA family: miR3699
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GACAGAAGATAGACTTTGGTC

miRNA*
 CCAGAGTCCATCTCTGTCAG

mismatches: 1
bulges: 1
View larger
pre-miRNA
 GGCAAAGGTGTCTTGTTTCCAGTTGTTTCTTGACAGAAGATAGACTTTGGTCCTATGGAGAAACAGCCTTCGCGACTTCCTTTTTATTGATTACTCCTAT
TTCATGCAGTGGTAAGTAACAAGAAGGGCAAGGTTAAGGGCAAGTTTCGCCATATCAGGTGACCAGAGTCCATCTCTGTCAGGAAACAAGGATCAAGTAA
CAAACACTTG

dot-bracket secondary structure
.....((((((((((..(((..(((((((((((((((.(((.((((((((((((((((.(((((.(((((...((((((((((((.(((.(((((.((..
.......)).))))).))).))))))))...)))).)))))..))))).))))....)).)))))))))).))))))))))))))))))))).))))...
...)))))).


SIMILARITIES
miRBase pab-MIR3699: 4e-30

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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