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Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST001961
species: Picea glauca
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCCAAGGATGACTTGCCAGC

miRNA*
 TGGCAAGTATCCTTGGCTAC

mismatches: 0
bulges: 1
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pre-miRNA
 ATCATGTAGGGTCTTGCATGGAGGGCGGCAGCGAGTGATGGAGCCAAGGATGACTTGCCAGCATCTATCACTCAGCAGGAATCTGAAGGGGTTTTGTACG
ACGTCATCATATGCAGGGGAGAGTTGGCAAGTATCCTTGGCTACATATCTCGGAGTGCTCCTCATGCGAGACCTCAGATGAG

dot-bracket secondary structure
.((((...(((((((((((((.(((((....((((..(((.((((((((((.((((((((((.(((....(((.(((......(((.((.(((......)
)).)).)))..))).))).))))))))))))))))))))))).)))..))))...))))).)))))))))))))...)))).


SIMILARITIES
miRBase gma-MIR169a: 0.000009

PMRD gma-miR169a: 0.000009

microPC miR169: 7e-53		UniProt no hits

RFAM MIR169_2: 0.0007		most similar mature miRNAs

Identical with: miR169 from microPC (MNEST045443)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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