miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea glauca



ABOUT THIS RECORD

ID: MNEST001964
species: Picea glauca
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACAGCTTTCTTGAACTA

miRNA*
 GCTCAAGAAAGCTGTGGGAAA

mismatches: 2
bulges: 0
View larger
pre-miRNA
 GCGATGAATCCCGCCATGCTCTTCCACAGCTTTCTTGAACTAAGAGTCGATCGGATCCGGTCAGTTCAGAGCTCAAGAAAGCTGTGGGAAAACATGGGCG
GATTCGATG

dot-bracket secondary structure
....(((((((..(((((...(((((((((((((((((.((..((((.(((((....))))).))))..)).)))))))))))))))))...)))))..)
))))))...


SIMILARITIES
miRBase pab-MIR396a: 6e-52

PMRD ath-miR396b: 0.00000002

microPC miR396: 7e-33		UniProt no hits

RFAM MIR396: 0.0000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;