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Species belonging to selected taxon:
Cryptomeria japonica
,
Picea abies
,
Picea engelmannii x Picea glauca
,
Picea glauca
,
Picea sitchensis
,
Pinus banksiana
,
Pinus contorta
,
Pinus pinaster
,
Pinus taeda
,
Pseudotsuga menziesii var. menziesii
ABOUT THIS RECORD
ID:
MNEST001969
species:
Picea glauca
miRNA family:
MIRf869
source:
miRNEST
Taxonomy by NCBI:
Picea glauca
Picea
Pinaceae
Coniferales
Coniferopsida
Coniferophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCAAGAAAGCCGTGGAAAAG
miRNA*
TTCCCACGGCTTGCTTGAGCT
mismatches:
2
bulges:
0
View larger
pre-miRNA
CCTCTATATT
TTCCCACGGCTTGCTTGAGCT
TCTTATCCGGATCTGTTAGCGGTCGGGAAG
TTCAAGAAAGCCGTGGAAAAG
TATGACA
dot-bracket secondary structure
....((((((
((.(((((((((.((((((((
((((..(((..........)))..))))))
)))))).))))))))).))))
))))...
SIMILARITIES
miRBase
pab-MIR396c
:
0.00000000002
PMRD
pta-miR396
:
0.00000002
microPC
miR396
:
0.00000000007
UniProt
no hits
RFAM
MIR396: 0.0000003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record