miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST002039
species: Pinus taeda
miRNA family: MIRf516
source: miRNEST

Taxonomy by NCBI:
Pinus taeda Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGTCGCGGTGGAGGAGGAAG

miRNA*
 AATTTCTCCCTCGTCGTCGTAC

mismatches: 5
bulges: 1
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pre-miRNA
 TCAAGCGTTACTAATTTCTCCCTCGTCGTCGTACTTGCAATCATGGCTCGTCGCGGTGGAGGAGGAAGGCCCGCTCC

dot-bracket secondary structure
...((((...((..(((((((.(((.((.((.....((.......)).)).))))).)))))))..))...))))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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