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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000204
species: Barnadesia spinosa
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Barnadesia spinosa Barnadesia Barnadesioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCGTCACCATCATCATCA

miRNA*
 GTGGTCATGGCTGCCATGTGA

mismatches: 5
bulges: 0
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pre-miRNA
 ATTGCCCCCATGGTGGTCATGGCTGCCATGTGATCATCGTCACCATCATCATCATATCCTATT

dot-bracket secondary structure
.........((((((((.((((..((.(((....))).))..)))).))))))))........


SIMILARITIES
miRBase ath-MIR414: 0.0007

PMRD ath-miR414: 0.0007

microPC no hits		UniProt no hits

RFAM mir-598: 0.00005		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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