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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Panax ginseng, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000209
species: Barnadesia spinosa
miRNA family: miR166g
source: miRNEST

Taxonomy by NCBI:
Barnadesia spinosa Barnadesia Barnadesioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGTTTGGCTCGAGG

miRNA*
 TCGGACCAGGCTTCATTCCCC

mismatches: 5
bulges: 0
View larger
pre-miRNA
 TAGCTTTTGAGGGGAATGTTGTTTGGCTCGAGGTCACTAGAAAACCTTAATTTGATTTTGATCTTAATTTCTCCTTTTTTCTTCTCCGTGTGTGTTTGTG
TACTCAATTAGTCAACGGATCCATGATCCATGATCTTTGTTGATTAATTATTATGAGTTTCAAATTAATGGCATCCGTCGTTTGAGTGATTAAATTAAGG
AGTAAATCTGGATCATTATATAGGATCTGGTGTCATCGGACCAGGCTTCATTCCCCCCAATTCTT

dot-bracket secondary structure
......(((.((((((((..((((((.((((...(((((((...(((.......((..((((((..((((((((((...((..(((.......(((((..
.((((((((((((((((((((.(((...))))))))..)))))))))).....)))))..))))).((((((....)))))).))).)).......))))
)).))))..))))))..))..))).)))))))...)))).))))))..)))))))).))).....


SIMILARITIES
miRBase ptc-MIR166a: 0.00000000006

PMRD ptc-miR166a: 0.00000000006

microPC miR166: 0.000000004		UniProt no hits

RFAM mir-166: 0.00000002		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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