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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST002109
species: Populus euphratica
miRNA family: MIR2911
source: miRNEST

Taxonomy by NCBI:
Populus euphratica Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGCCGGGGGACGGACTGGGAA

miRNA*
 CCCAGTCCCGAACCCGTCGG

mismatches: 5
bulges: 1
View larger
pre-miRNA
 TCTGAGGGCTGGGCTCGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGTCGCGTGCCGGCC
GGGGGACGGACTGGGAACGGCCCCTCCGGGGGCCTT

dot-bracket secondary structure
((((((.......))))))..(((((((((....(((((((((((.((((((.((((((..(((((....)))))..)))))).)))))))).))))).)
)))....)))))))))..((((((....))))))..


SIMILARITIES
miRBase peu-MIR2911: 4e-44

PMRD peu-miR2911: 4e-44

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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