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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST002113
species: Populus nigra
miRNA family: MIRf45
source: miRNEST

Taxonomy by NCBI:
Populus nigra Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGTATAGGGGAGCTTCTGGT

miRNA*
 ATTAAGCTCCCCTGAAGAGA

mismatches: 5
bulges: 1
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pre-miRNA
 ATTTCCTCATCTTGTATAGGGGAGCTTCTGGTTCTTCTGAGGTAAATATTAAGCTCCCCTGAAGAGATCTGCCCT

dot-bracket secondary structure
........(((((...(((((((((((...(((..((...))..)))...)))))))))))..))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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