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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST002167
species: Populus tremula
miRNA family: MIRf591
source: miRNEST

Taxonomy by NCBI:
Populus tremula Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGCAAGTCATCCTTGGCTGCA

miRNA*
 TAGCCAAGAACAACCTGCCAA

mismatches: 5
bulges: 0
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pre-miRNA
 TAATCACCATAAGCCTGGCATGAGGAGCAGAAAGAAAAATGTAGCCAAGAACAACCTGCCAACGGATTCATCTCTTCTTGATTATGCCTATATTGATGGA
AGCAAAAGCAAAAGCGAGTCGTCGGCAAGTCATCCTTGGCTGCATCAATCTTTATGATCCTCCATGGAAGGCTGTTACAGTG

dot-bracket secondary structure
...........(((((..((((((((.((.(((((...(((((((((((....((.((((.((((.....((.(((.(((.((.(((((((....)))).
.))).)).)))))).)).)))).)))).))....)))))))))))...))))).)).)))).))))..))))).........


SIMILARITIES
miRBase ptc-MIR169b: 4e-42

PMRD ptr-miR169a: 3e-52

microPC miR169: 1e-51		UniProt no hits

RFAM MIR169_2: 2e-44		most similar mature miRNAs

Identical with: miR169 from microPC (MNEST045442)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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