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Species belonging to selected taxon:
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Populus trichocarpa
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST002178
species:
Populus tremula x Populus alba
miRNA family:
MIRf746
source:
miRNEST
Taxonomy by NCBI:
Populus tremula x Populus alba
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGCGGTGATTGAACGGAGG
miRNA*
TTCTTTACTTACCGTCTTAC
mismatches:
3
bulges:
1
View larger
pre-miRNA
TGGAAGAACTTGACCGTTGGA
TTGGCGGTGATTGAACGGAGG
GTCGATCC
TTCTTTACTTACCGTCTTAC
AGAAGTCAACATTCTATT
dot-bracket secondary structure
.((((....(((((..(((..
..((((((((.((((.(((((
(....)))
))))))).))))))))...)
))..)))))..))))...
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf10132-akr
:
0.00000000000002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record