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Species belonging to selected taxon:
Populus deltoides
,
Populus euphratica
,
Populus nigra
,
Populus tremula
,
Populus tremula x Populus alba
,
Populus tremula x Populus tremuloides
,
Populus tremuloides
,
Populus trichocarpa x Populus nigra
,
Populus x canadensis
,
Populus trichocarpa
,
Populus trichocarpa x Populus deltoides
ABOUT THIS RECORD
ID:
MNEST002219
species:
Populus tremuloides
miRNA family:
MIRf798
source:
miRNEST
Taxonomy by NCBI:
Populus tremuloides
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGTTTTCTTAGTGAACTA
miRNA*
GTGAGCTTGAAAGCACAATC
mismatches:
4
bulges:
1
View larger
pre-miRNA
AATGCAATCTTG
GTGAGCTTGAAAGCACAATC
AAATTAT
TTTTGTTTTCTTAGTGAACTA
AATCAAAAT
dot-bracket secondary structure
.........(((
((..(((.(((((((.((..
.......
)).)))))))..)))..))))
)........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record