ABOUT THIS RECORDspecies: Prunus armeniaca
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Prunus armeniaca Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTTCCTACTCCACCCATTC miRNA* GTGGGAGAGTGGGAAAAGAA mismatches: 2 bulges: 1 |
pre-miRNA
GGAGAGTTGAAAAGAAGGGTGGGGATAGGAAAGGCTTGAGGAAGCTGTTGGAGTGGGAGAGTGGGAAAAGAATGGATCTCTTTGGTTGGTTCAAAGGGAA
CAAATTTCTTTCCTACTCCACCCATTCCTGCAATTTCCTTAGGTTTCTCCCTTTCCCTTTCCTCTTCTTGTTAGAA
dot-bracket secondary structure
......((((.((((((((.(((((..(((.(((((((((((((.(((.((((((((.((((((((((.((((...(((((((((.....))))))))).
...)))).))))))))))..)))))))).))).))))))))))))).)))...)))))...)))))))).))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGAGAGTTGAAAAGAAGGGTGGGGATAGGAAAGGCTTGAGGAAGCTGTTGGAGTGGGAGAGTGGGAAAAGAATGGATCTCTTTGGTTGGTTCAAAGGGAA
CAAATTTCTTTCCTACTCCACCCATTCCTGCAATTTCCTTAGGTTTCTCCCTTTCCCTTTCCTCTTCTTGTTAGAA
dot-bracket secondary structure
......((((.((((((((.(((((..(((.(((((((((((((.(((.((((((((.((((((((((.((((...(((((((((.....))))))))).
...)))).))))))))))..)))))))).))).))))))))))))).)))...)))))...)))))))).))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
