miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Fragaria vesca, Fragaria x ananassa, Humulus lupulus, Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST002246
species: Prunus persica
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACAGCTTTCTTGAACT

miRNA*
 TTCAATAAAGCTGTGGGAAG

mismatches: 1
bulges: 0
View larger
pre-miRNA
 TCCTCCATAGACGATGATCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATCCATGAGATCGATCGATCTTTGCATGTGAGGCTGCAGTCACTCAC
TCACTCTCTCTCTAACTGGCTTGCGGTTCAATAAAGCTGTGGGAAGATACAGATAGGTTCAATAAAAAATCACT

dot-bracket secondary structure
..............(((.(((.((((((((.((((((((((((.((((((((((.(((.((((((....))))))((.....((((.((.(((.....))
))).))))....))..)))..)))))))))).)))))))))))).)))))))).))).))).............


SIMILARITIES
miRBase csi-MIR396b: 0.000000000000002

PMRD gma-miR396a: 0.000000000000002

microPC miR396: 4e-57		UniProt no hits

RFAM MIR396: 0.0000000000007		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;