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Species belonging to selected taxon:
Prunus armeniaca
,
Prunus persica
ABOUT THIS RECORD
ID:
MNEST002249
species:
Prunus persica
miRNA family:
MIRf104
source:
miRNEST
Taxonomy by NCBI:
Prunus persica
Prunus
Amygdaleae
Spiraeoideae
Rosaceae
Rosales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTTCGGTTTGAACCGGTTTCG
miRNA*
GAACCGGTCCAAACCGGTCCG
mismatches:
3
bulges:
0
View larger
pre-miRNA
AAAAATTTCAAAAACTGTCCG
GTTCGGTTTGAACCGGTTTCG
GTCCAGTTCCGGTTCCGGTTCGATTTTGAACAGGATTATAAAAATTATTTTTTTAAAT
TGCTTTTTAATACAATTCTCAACTGAAATATTATTTTTTTACTTGAAAATTAACAAATTATTCAATTTCATATAAAAAATAAATATTAAAGTGAGAAAAG
AGAGATATTTTGACATTGAACTTGGATAAATATTATATTTTTTTTAGTGAAATTAAAAATATAACATTAAATATAAATATATATTGAAATTATATATTTT
TTTAGTTTCACCGGTTCGGTTCGGCCCGGTTCAGTTTTTGAAGACATGGAACCGGATCCA
GAACCGGTCCAAACCGGTCCG
GTTCAGTTTTTGACCGGT
dot-bracket secondary structure
.......((((((((((.(((
(.((((((((.((((((((.(
(......((((((((((.(((((..((((((.((....((((((.....))))))(((
..((((((.......((((((.((..((((((..(((((((..(((((.................)))))..)))))))..))))))..)))))))).))
))))..)))((((.((((((((.(((.(((((...)))))..))).(((((((((((((.(((......((((((....)))))).........))).))
))))))))))).)))))))))))).)).))))))...)))))....)))))))))).)).
)))))))).)))))))).)))
)..)))))))))).....
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf12125-akr
:
0.0003
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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