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Species belonging to selected taxon:

Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST002254
species: Prunus persica
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGAAAGAGAGCAC

miRNA*
 GCTCTCTCTTCTTCTGTCATCA

mismatches: 1
bulges: 1
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pre-miRNA
 TGATGTGAATGTGAATGAGCTGAGAGATCATGTTGACAGAAGAAAGAGAGCACAACCCGCCATTGGCCAAAGAGATCTTCGCCACTGTTGGGAGTGTGCTC
TCTCTTCTTCTGTCATCATCTCTTGCATTCCCACATCTGTGATGTT

dot-bracket secondary structure
)((((((.....(((((....((((((...((.(((((((((((((((((((((.((((.((.((((.((.......)).)))).)).))))..)))))))
))).))))))))))).)))))))).))))).)))))).........


SIMILARITIES
miRBase rco-MIR156e: 2.0E-21

PMRD gma-miR156b: 3.0E-17

microPC miR157: 3.0E-42		UniProt no hits

RFAM 6mir-156: 6.0E-16		most similar mature miRNAs

Identical with: miR156 from microPC (MNEST045433), miR157 from microPC

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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