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Species belonging to selected taxon:

Fragaria vesca, Fragaria x ananassa, Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST002263
species: Prunus persica
miRNA family: MIRf1215
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTGGTCACTTTGTTTATAGG

miRNA*
 TGTGAACATCTTGACCAAGGT

mismatches: 4
bulges: 0
View larger
pre-miRNA
 CCATTCAAATCCCTGGTCACTTTGTTTATAGGACCAGGTTCTCTAGGACATCTGGGAAGAGCTTTCTCTTGCCACAATGCAGAACAGATGTTTTGTATGT
GTCTGATCCCTGTGAACATCTTGACCAAGGTGAAGAGGG

dot-bracket secondary structure
((.((((...((.((((((...((((((((((....((((.....((((((.(((.(((((....))))).)))..(((((((((....)))))))))))
))))))))))))))))))...)))))).))))))..)).


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11908-akr: 6e-37

microPC no hits		UniProt sp|Q9LF38|EDL1_ARATH: 1e-17

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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