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Species belonging to selected taxon:

Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST002264
species: Prunus persica
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCACTGCCTCTTCCCTGGCT

miRNA*
 ACAGGGAACAGGTAGAGCATG

mismatches: 3
bulges: 0
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pre-miRNA
 AGACTGATAAGACAGGGAACAGGTAGAGCATGGATGGAGTTCCCAACAGAAAAATAGAGCTGTTGTGGCTCTACTCATGCACTGCCTCTTCCCTGGCTGC
CGTCCT

dot-bracket secondary structure
.(((.....((.(((((((.((((((.((((((.(((((((..((((((..........)))))).))))))).)))))).)))))).))))))).))..
.)))..


SIMILARITIES
miRBase ptc-MIR408: 0.0000000003

PMRD ppe-miR408: 2e-54

microPC miR408: 2e-45		UniProt no hits

RFAM MIR408: 0.0000000000004		most similar mature miRNAs

Identical with: miR408 from microPC (MNEST046159)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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