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Species belonging to selected taxon:

Pseudoroegneria spicata



ABOUT THIS RECORD

ID: MNEST002286
species: Pseudoroegneria spicata
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTACCTCCGTCCCAAAATA

miRNA*
 TTTTGGGACGGGGGTAGTATA

mismatches: 0
bulges: 0
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pre-miRNA
 GCATTAGGAAATACTACCTCCGTCCCAAAATATAAGACGTTGCAGTTCAAATTTGAACTGCAAAAACGTCTTATATTTTGGGACGGGGGTAGTATATTTCA
AG

dot-bracket secondary structure
).....(((((((((((((((((((((((((((((((((((((((((((....)))))))))...)))))))))))))))))))))))))))))).)))).
..


SIMILARITIES
miRBase osa-MIR1439: 3.0E-7

PMRD osa-miR1439: 3.0E-7

microPC miR1439: 5.0E-6		UniProt no hits

RFAM 2MIR1122: 2.0E-11		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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