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Species belonging to selected taxon:

Pseudoroegneria spicata



ABOUT THIS RECORD

ID: MNEST002287
species: Pseudoroegneria spicata
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCCGACCCAAAATAAGTGT

miRNA*
 ACTAATTTTGGATTGGAGGGA

mismatches: 2
bulges: 0
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pre-miRNA
 GATGGATATAATTTAGTACTCCCTCCGACCCAAAATAAGTGTCGCGGTTTTGAACTACACTAATTTTGGATTGGAGGGATAGAAATTAAGAAAGAAG

dot-bracket secondary structure
........((((((.....(((((((((.(((((((.(((((...((((...))))))))).))))))).)))))))))...)))))).........


SIMILARITIES
miRBase bdi-MIR5180b: 0.00000002

PMRD psa-miR1120: 0.00002

microPC miR1439: 0.00007		UniProt no hits

RFAM MIR1122: 0.000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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