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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST002292
species: Pseudoroegneria spicata
miRNA family: MIRf300
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGGCAAGTCATCCTTGGCTAC

miRNA*
 AGCCAAGGAGACTGCCTGT

mismatches: 2
bulges: 2
View larger
pre-miRNA
 AGCCACTCGGGCTAGCCAAGGAGACTGCCTGTGCGCAGTGGGAGACCGGTCCAGAGAGAGAGATCACATTCATGGCCACAGGCAAGTCATCCTTGGCTAC
CAGAAGAAGC

dot-bracket secondary structure
((((.....))))((((((((((((((((((((.((..((((.......))))(((.((....))...)))...))))))))).)))).)))))))))..
..........


SIMILARITIES
miRBase zma-MIR169k: 0.00000000009

PMRD zma-miR169k: 0.00000000009

microPC miR169: 0.00000009		UniProt no hits

RFAM MIR169_5: 0.000000002		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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