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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST002292
species: Pseudoroegneria spicata
miRNA family: MIRf300
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGGCAAGTCATCCTTGGCTAC

miRNA*
 AGCCAAGGAGACTGCCTGT

mismatches: 2
bulges: 2
View larger
pre-miRNA
 AGCCACTCGGGCTAGCCAAGGAGACTGCCTGTGCGCAGTGGGAGACCGGTCCAGAGAGAGAGATCACATTCATGGCCACAGGCAAGTCATCCTTGGCTAC
CAGAAGAAGC

dot-bracket secondary structure
((((.....))))((((((((((((((((((((.((..((((.......))))(((.((....))...)))...))))))))).)))).)))))))))..
..........


SIMILARITIES
miRBase zma-MIR169k: 0.00000000009

PMRD zma-miR169k: 0.00000000009

microPC miR169: 0.00000009		UniProt no hits

RFAM MIR169_5: 0.000000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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