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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST002296
species: Pseudoroegneria spicata
miRNA family: MIR2033
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTTCTTTACAAAGGGAGTA

miRNA*
 CTCCCTCTGTAGTGATCTA

mismatches: 3
bulges: 2
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pre-miRNA
 TGAAGAATTCCGACCATGCTACTACAGTTATACTCCCTCTGTAGTGATCTAAACGCTCTTATATTTCTTTACAAAGGGAGTATATTTCTGTAGTTGGAGG
AGGGAGGACTT

dot-bracket secondary structure
..(((..((((..((...(((((((((.((((((((((.(((((.(((.(((......))).)))...))))).))))))))))...)))))).))).))
..))))..)))


SIMILARITIES
miRBase tae-MIR1121: 0.000000000001

PMRD ave-miR1120: 0.00000000000002

microPC miR1121: 0.0003		UniProt no hits

RFAM MIR1122: 0.0000000000004		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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